Supplementary Material and raw data for “Bar-seq analysis of Aspergillus fumigatus kinome library during infection of airway epithelial cells”

<p dir="ltr">To investigate the role of Aspergillus fumigatus genes encoding for protein kinase functions, we infected A549 alveolar epithelial cells with a pool of 111 A. fumigatus barcoded null mutants in genes encoding protein kinases and utilised bar-seq to identify which of these are involved in survival within A549 cells. This folder contains:</p><p dir="ltr"><i>Underlying data</i></p><ul><li>Earle F1000 Gate Away Data.xls (raw data for figures).</li></ul><p dir="ltr"><i>Extended data</i></p><ul><li>Earle F1000 Supplementary Figures.pdf (Supplementary Figures 1 & 2)</li><li>Earle F1000 Code Deseq2.txt (R code for Deseq2 analysis)</li><li>Earle F1000 Code Volcano Plot.txt (R code to do Volcano plots shown in Supplementary Figure 2)</li><li>Earle F1000 Code Heatmap.txt (R code to do Heatmap as shown in Figure 1)</li><li>Earle F1000 Code get_txt IDs for genes of interest (R code to get IDs for genes of interest)</li><li>Earle F1000 kinasebc.txt (list of barcodes for individual deletion mutants in the kinase library)</li><li>Earle F1000 Code get counts.txt (R code to retrieve gene counts)</li></ul><p></p>